Information for 7-ATCTTCCC (Motif 10)


Reverse Opposite:

p-value:1e-9
log p-value:-2.297e+01
Information Content per bp:1.790
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif6.08%
Number of Background Sequences with motif20.6
Percentage of Background Sequences with motif1.53%
Average Position of motif in Targets35.3 +/- 19.2bp
Average Position of motif in Background37.7 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ARR10(GARP)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----ATCTTCCC
GCGGATCTTANC

GCR2/MA0305.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ATCTTCCC
-GCTTCCT

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ATCTTCCC
-GCTTCC-

GCR2(MacIsaac)/Yeast

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ATCTTCCC
-GCTTCCN

Ik-1

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTCCC----
GGTATTCCCAANN

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATCTTCCC---
--CTGCCCGCA

ARR2/MA0949.1/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATCTTCCC
GCGAATCTTT--

TaMYB80(MYB)/Triticum aestivum/AthaMap

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATCTTCCC
NGGATATTCCC

PB0124.1_Gabpa_2/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATCTTCCC------
CCGTCTTCCCCCTCAC

ARR1/MA0945.1/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ATCTTCCC
AGCGAATCTT---