Information for 9-CCCACGTG (Motif 11)


Reverse Opposite:

p-value:1e-9
log p-value:-2.109e+01
Information Content per bp:1.789
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets38.4 +/- 19.7bp
Average Position of motif in Background32.4 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PHO4(MacIsaac)/Yeast

Match Rank:1
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:CCCACGTG
-CCACGTG

SPT/MA1061.1/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:CCCACGTG-
CCCACGTGC

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:CCCACGTG
GCCACGTG

PHO4/PHO4_Pi-/38-PHO4(Harbison)/Yeast

Match Rank:4
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:CCCACGTG
-CCACGTG

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CCCACGTG
NCCACGTG

PIF3/MA0560.1/Jaspar

Match Rank:6
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CCCACGTG-
AGCCACGTGA

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:CCCACGTG---
-CCACGTGGNN

Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer

Match Rank:8
Score:0.92
Offset:0
Orientation:forward strand
Alignment:CCCACGTG--
CCCACGTGCT

UNE10/MA1074.1/Jaspar

Match Rank:9
Score:0.92
Offset:1
Orientation:forward strand
Alignment:CCCACGTG-
-CCACGTGC

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:CCCACGTG---
-CCACGTGGNN