Information for 11-AGTGAGCCGAGA (Motif 14)


Reverse Opposite:

p-value:1e-7
log p-value:-1.819e+01
Information Content per bp:1.877
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif3.26%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets45.8 +/- 22.0bp
Average Position of motif in Background52.8 +/- 3.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

toy/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGTGAGCCGAGA
ATGAGTGAGGGG---

MAC1(MacIsaac)/Yeast

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGTGAGCCGAGA
--TGAGCGAAAA

RTG3/Literature(Harbison)/Yeast

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTGAGCCGAGA
-GTGACC-----

YAP1/YAP1_H2O2Lo/3-YAP1(Harbison)/Yeast

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGTGAGCCGAGA
TTAGTCAGC-----

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGTGAGCCGAGA-----
--GNNACCGAGAATNNN

YAP1(MacIsaac)/Yeast

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGTGAGCCGAGA
ATTAGTCAGCA----

Trl/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGTGAGCCGAGA
GAGAGAGCAA---

Trl/MA0205.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGTGAGCCGAGA
GAGAGAGCAA---

PDR8/MA0354.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGTGAGCCGAGA-
-----ACGGAGAT

CAD1/CAD1_YPD/2-CAD1,2-YAP1(Harbison)/Yeast

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTGAGCCGAGA
ATTAGTAAGC-----