Information for 17-TTCTCTTTGA (Motif 15)


Reverse Opposite:

p-value:1e-7
log p-value:-1.816e+01
Information Content per bp:1.835
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets36.6 +/- 18.0bp
Average Position of motif in Background29.9 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

pan/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TTCTCTTTGA-
----CTTTGAT

AZF1/MA0277.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCTTTGA
TTTCTTTTT--

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTCTCTTTGA-----
-TNCCTTTGATCTTN

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCTTTGA------
NNTTCCTTTGATCTANA

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTCTCTTTGA---
-TNCCTTTGATGT

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCTTTGA------
NNTTCCTTTGATCTNNA

blmp-1/MA0537.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTCTCTTTGA
TTTTCNCTTTT-

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTCTCTTTGA------
ATTTCCTTTGATCTATA

br-Z1/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCTCTTTGA
TTCTATTT--

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TTCTCTTTGA---
---CCTTTGATGT