Information for 11-GACCGCGG (Motif 17)


Reverse Opposite:

p-value:1e-7
log p-value:-1.630e+01
Information Content per bp:1.643
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif3.19%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets36.7 +/- 22.6bp
Average Position of motif in Background38.0 +/- 38.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PDR1/MA0352.1/Jaspar

Match Rank:1
Score:0.85
Offset:1
Orientation:forward strand
Alignment:GACCGCGG-
-TCCGCGGA

Adf1/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GACCGCGG
CGACCGCG-

PDR3/MA0353.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GACCGCGG-
-TCCGCGGA

PDR3/Literature(Harbison)/Yeast

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GACCGCGG-
-TCCGCGGA

PDR3(MacIsaac)/Yeast

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GACCGCGG-
-TCCGCGGA

SUT1(MacIsaac)/Yeast

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GACCGCGG--
---CGCGGGG

RSC3/MA0374.1/Jaspar

Match Rank:7
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GACCGCGG--
---CGCGCGG

NHP10/MA0344.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GACCGCGG-
-GCCGGGGA

SUT1/MA0399.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GACCGCGG--
---CGCGGGG

PHD1/PHD1_BUT90/8-SUT1(Harbison)/Yeast

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GACCGCGG-
-GCCGCAGG