Information for 12-GTATGAGA (Motif 18)


Reverse Opposite:

p-value:1e-6
log p-value:-1.474e+01
Information Content per bp:1.816
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets40.1 +/- 18.9bp
Average Position of motif in Background40.7 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SMZ/MA0553.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTATGAGA
GTACGAGG

ems/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTATGAGA
TAATGACA

Achi/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTATGAGA--
NTTTGACAGC

so/MA0246.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTATGAGA
GTATCA--

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTATGAGA
AGGTGTGA--

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTATGAGA
AGGTGTGA--

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTATGAGA
-CATGAC-

Six4/MA0204.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTATGAGA
GTATCA--

POPTR_0002s00440g/MA0955.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTATGAGA
GGTACGG--

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTATGAGA
GAGTATAA--