Information for 1-CCTCDGCCTCCC (Motif 2)


Reverse Opposite:

p-value:1e-25
log p-value:-5.800e+01
Information Content per bp:1.627
Number of Target Sequences with motif194.0
Percentage of Target Sequences with motif14.39%
Number of Background Sequences with motif44.9
Percentage of Background Sequences with motif3.33%
Average Position of motif in Targets34.5 +/- 17.6bp
Average Position of motif in Background41.8 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF263/MA0528.1/Jaspar

Match Rank:1
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CCTCDGCCTCCC--
TCCTCCTCCCCCTCCTCCTCC

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCTCDGCCTCCC
GGGGCCGAGGCCTG--

GCR2/MA0305.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CCTCDGCCTCCC
-----GCTTCCT

GCR2(MacIsaac)/Yeast

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CCTCDGCCTCCC
-----GCTTCCN

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCTCDGCCTCCC
GCTCGGSCTC--

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCTCDGCCTCCC-
TGCCTGCGYCMCCTT

Dip3/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTCDGCCTCCC
CCACNCCNTNCC

CRZ1(MacIsaac)/Yeast

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCTCDGCCTCCC
---CAGCCAC--

ADR1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CCTCDGCCTCCC
------ACCCCN

ADR1(MacIsaac)/Yeast

Match Rank:10
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CCTCDGCCTCCC
------ACCCCN