Information for 2-AWKDGCTGGR (Motif 4)


Reverse Opposite:

p-value:1e-22
log p-value:-5.280e+01
Information Content per bp:1.462
Number of Target Sequences with motif175.0
Percentage of Target Sequences with motif12.98%
Number of Background Sequences with motif39.1
Percentage of Background Sequences with motif2.90%
Average Position of motif in Targets33.8 +/- 19.5bp
Average Position of motif in Background32.2 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SWI5/Literature(Harbison)/Yeast

Match Rank:1
Score:0.78
Offset:3
Orientation:forward strand
Alignment:AWKDGCTGGR
---GGCTGA-

ACE2/MA0267.1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:AWKDGCTGGR
---TGCTGGT

SWI5/MA0402.1/Jaspar

Match Rank:3
Score:0.74
Offset:3
Orientation:forward strand
Alignment:AWKDGCTGGR-
---TGCTGGTT

SWI5(MacIsaac)/Yeast

Match Rank:4
Score:0.72
Offset:3
Orientation:forward strand
Alignment:AWKDGCTGGR-
---TGCTGGTT

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AWKDGCTGGR--
--WDNCTGGGCA

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.68
Offset:4
Orientation:forward strand
Alignment:AWKDGCTGGR
----GCTGTG

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AWKDGCTGGR
---TGCTGGT

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AWKDGCTGGR
---NGCTN--

sma-4/MA0925.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AWKDGCTGGR-
AGTGTCTGGAC

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AWKDGCTGGR----
AAANTGCTGACTNAG