Information for 2-GGGAYTACAGGY (Motif 5)


Reverse Opposite:

p-value:1e-21
log p-value:-5.054e+01
Information Content per bp:1.631
Number of Target Sequences with motif149.0
Percentage of Target Sequences with motif11.05%
Number of Background Sequences with motif28.0
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets36.4 +/- 17.1bp
Average Position of motif in Background37.3 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ARALYDRAFT_496250/MA1096.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGAYTACAGGY
GGGACCAC----

TCP5/MA1067.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGGAYTACAGGY
GGGACCAC----

TCP4/MA1035.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGAYTACAGGY
GGGACCAC----

Ptx1/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGAYTACAGGY
GGGATTAACN--

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GGGAYTACAGGY
TTAGAGGGATTAACAAT

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGGAYTACAGGY
NGGGATTA-----

bcd/MA0212.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGGAYTACAGGY
-GGATTA-----

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGAYTACAGGY
GGGATTAA----

oc/MA0234.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGGAYTACAGGY
-GGATTA-----

Gsc/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGGAYTACAGGY
-GGATTA-----