Information for 7-CGTGGTGGCK (Motif 7)


Reverse Opposite:

p-value:1e-15
log p-value:-3.532e+01
Information Content per bp:1.760
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif4.38%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets33.9 +/- 18.2bp
Average Position of motif in Background32.2 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RPN4/MA0373.1/Jaspar

Match Rank:1
Score:0.80
Offset:3
Orientation:forward strand
Alignment:CGTGGTGGCK
---GGTGGCG

MET31/MA0333.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CGTGGTGGCK
-AGTGTGGCG

MET32/MA0334.1/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CGTGGTGGCK
---TGTGGCG

ERF1B/MA0567.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGTGGTGGCK
--TGGCGGCG

CRZ1/MA0285.1/Jaspar

Match Rank:5
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:CGTGGTGGCK---
----GTGGCTNNG

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CGTGGTGGCK--
---GGTGGCAAA

Run/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGTGGTGGCK
GGCGGTG---

ERF094/MA1049.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGTGGTGGCK
--CGGCGGCG

RPN4(MacIsaac)/Yeast

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CGTGGTGGCK---
--CGGTGGCAAAA

ERF13/MA1004.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGTGGTGGCK
--TGGCGGCG