Information for 6-GTGAGCCACTGT (Motif 8)


Reverse Opposite:

p-value:1e-12
log p-value:-2.866e+01
Information Content per bp:1.633
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif5.12%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets35.9 +/- 19.4bp
Average Position of motif in Background35.4 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCN4(MacIsaac)/Yeast

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTGAGCCACTGT
-TGAGTCAT---

FOSL2/MA0478.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGAGCCACTGT
NTGAGTCATCN-

Hr46/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTGAGCCACTGT
-TGACCC-----

CRZ1/MA0285.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTGAGCCACTGT
CTAAGCCAC---

FOSL1/MA0477.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTGAGCCACTGT
NATGAGTCACC--

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGAGCCACTGT
-TGAGTCA----

FOS/MA0476.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGAGCCACTGT
TGTGACTCATT--

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTGAGCCACTGT
ATGAGTCATCN-

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGAGCCACTGT
ATAATCCC----

GCN4/MA0303.1/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GTGAGCCACTGT---
CAAGGGATGAGTCATACTTCA