Information for 5-GGNKGAGGCAGG (Motif 10)


Reverse Opposite:

p-value:1e-6
log p-value:-1.536e+01
Information Content per bp:1.563
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif3.04%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets36.6 +/- 18.0bp
Average Position of motif in Background34.3 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0097.1_Zfp281_1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGNKGAGGCAGG---
GGGGGGGGGGGGGGA

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGNKGAGGCAGG--
GGGNGGGGGCGGGGC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGNKGAGGCAGG
GGGGGGGG----

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGNKGAGGCAGG---
---TGGGGAAGGGCM

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGNKGAGGCAGG--
AAGGKGRCGCAGGCA

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGNKGAGGCAGG--
GGCGGGGGCGGGGG

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGNKGAGGCAGG
GGGGNGGGGC---

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGNKGAGGCAGG
TGGGTGGGGC---

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGNKGAGGCAGG--
---GGGGGCGGGGC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGNKGAGGCAGG
DGGGYGKGGC---