Information for 9-AGATGGGAAC (Motif 11)


Reverse Opposite:

p-value:1e-6
log p-value:-1.476e+01
Information Content per bp:1.658
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets35.6 +/- 16.7bp
Average Position of motif in Background28.4 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Su(H)/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AGATGGGAAC
--ATGAGAA-

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGATGGGAAC-
-CSTGGGAAAD

Tal1

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGATGGGAAC
CAGATG-----

Su(H)/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGATGGGAAC
-CGTGGGAAC

PB0115.1_Ehf_2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGATGGGAAC-----
AAGATCGGAANTNNNA

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGGAAC
AACAGATGGC---

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGATGGGAAC
AAGGTGTGAA-

TBR1/MA0802.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGATGGGAAC
AGGTGTGAAA

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGATGGGAAC
TAGGTGTGAAG

Su(H)/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGATGGGAAC--
GAANGTGAGAACTA