Information for 5-CCTCCTGC (Motif 12)


Reverse Opposite:

p-value:1e-6
log p-value:-1.415e+01
Information Content per bp:1.785
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif6.52%
Number of Background Sequences with motif48.5
Percentage of Background Sequences with motif2.94%
Average Position of motif in Targets39.2 +/- 18.3bp
Average Position of motif in Background35.4 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CCTCCTGC-
-TNCCTGCA

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:2
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CCTCCTGC
CACTTCCTGT

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CCTCCTGC
CACTTCCTGT

sna/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCTCCTGC
CCACCTGC

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCTCCTGC----
CCCCCTGCTGTG

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCTGC-
ACTTCCTGTT

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCTCCTGC-
NNAYTTCCTGHN

PL0002.1_hlh-2::hlh-3/Jaspar

Match Rank:8
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CCTCCTGC-----
AGTAACACCTGCTAATC

RAV1(2)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCTCCTGC---
ATCACCTGAGGC

RAV1(var.2)/MA0583.1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCTCCTGC---
ATCACCTGAGGC