Information for 12-GAACTTATTT (Motif 14)


Reverse Opposite:

p-value:1e-5
log p-value:-1.262e+01
Information Content per bp:1.827
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets38.9 +/- 20.6bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GAACTTATTT
--AATTATT-

Antp/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAACTTATTT
--AATTAT--

kni/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAACTTATTT
GATCTCATTT

AHL12/MA0932.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAACTTATTT
-AATTAATT-

abd-A/dmmpmm(Down)/fly

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAACTTATTT
--ATTTAT--

GAT1/GAT1_RAPA/1-GZF3,2-GLN3(Harbison)/Yeast

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GAACTTATTT
---CTTATCT

GAT1(MacIsaac)/Yeast

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GAACTTATTT
---CTTATCT

bin/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GAACTTATTT--
-----TATTTAC

abd-A/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAACTTATTT
--AATTAT--

Antp/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GAACTTATTT
---ATTATT-