Information for 6-AATTTTTAAAAW (Motif 17)


Reverse Opposite:

p-value:1e-5
log p-value:-1.229e+01
Information Content per bp:1.611
Number of Target Sequences with motif153.0
Percentage of Target Sequences with motif9.68%
Number of Background Sequences with motif91.8
Percentage of Background Sequences with motif5.56%
Average Position of motif in Targets33.2 +/- 18.0bp
Average Position of motif in Background37.3 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown6/Drosophila-Promoters/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:AATTTTTAAAAW
-AATTTTAAAA-

gt/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AATTTTTAAAAW
--TTTTTA----

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.73
Offset:3
Orientation:forward strand
Alignment:AATTTTTAAAAW
---ATTTGAATT

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AATTTTTAAAAW--
----TTTGAAACCG

hb/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AATTTTTAAAAW
--TTTTTT----

SeqBias: A/T bias

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AATTTTTAAAAW
--AAAAAAAAAA

hb/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AATTTTTAAAAW
-TTTTTTAT---

CG11617/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AATTTTTAAAAW-
---ATTTAACATA

cad/dmmpmm(Down)/fly

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTTAAAAW
AAATTTTT-----

PB0080.1_Tbp_1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTTAAAAW---
NANTTATATATAANGN