Information for 1-GTAGCTGG (Motif 2)


Reverse Opposite:

p-value:1e-12
log p-value:-2.887e+01
Information Content per bp:1.845
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif3.04%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets36.8 +/- 19.3bp
Average Position of motif in Background35.8 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ovo/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GTAGCTGG
AGTAACGG-

CRZ1(MacIsaac)/Yeast

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTAGCTGG
GAGGCTG-

ACE2/MA0267.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GTAGCTGG-
--TGCTGGT

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------GTAGCTGG-
NNNTTAGGTAGCNTNT

ovo/MA0126.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTAGCTGG
AGTAACAGT

prd/MA0239.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTAGCTGG
AGTAACAGT

AtMYB15(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:7
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GTAGCTGG
CGACGGTAGGTGG

MYB15/MA0574.1/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GTAGCTGG
CGACGGTAGGTGG

SWI5/MA0402.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTAGCTGG--
--TGCTGGTT

ovo/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTAGCTGG
AGTAACNGT