Information for 7-AAGGAAAG (Motif 20)


Reverse Opposite:

p-value:1e-4
log p-value:-9.453e+00
Information Content per bp:1.600
Number of Target Sequences with motif468.0
Percentage of Target Sequences with motif29.62%
Number of Background Sequences with motif391.5
Percentage of Background Sequences with motif23.71%
Average Position of motif in Targets36.6 +/- 19.7bp
Average Position of motif in Background36.9 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

UME1/UME1_YPD/[](Harbison)/Yeast

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AAGGAAAG---
AAGGAAANGTA

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AAGGAAAG
NACAGGAAAT

AZF1/MA0277.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AAGGAAAG
AAAAAGAAA-

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AAGGAAAG-
AGAAACGAAAGT

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAGGAAAG---
AAGGCAAGTGT

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AAGGAAAG--
NDCAGGAARTNN

PBF/MA0064.1/Jaspar

Match Rank:7
Score:0.68
Offset:4
Orientation:forward strand
Alignment:AAGGAAAG-
----AAAGC

MNB1A/MA0053.1/Jaspar

Match Rank:8
Score:0.67
Offset:4
Orientation:forward strand
Alignment:AAGGAAAG-
----AAAGC

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAGGAAAG-
AATGGAAAAT

RME1(MacIsaac)/Yeast

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AAGGAAAG
TCCAAAGGAA--