Information for 9-ATATATAT (Motif 21)


Reverse Opposite:

p-value:1e-1
log p-value:-4.279e+00
Information Content per bp:1.856
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif5.51%
Number of Background Sequences with motif63.3
Percentage of Background Sequences with motif3.84%
Average Position of motif in Targets37.4 +/- 19.4bp
Average Position of motif in Background38.1 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPT15/MA0386.1/Jaspar

Match Rank:1
Score:0.90
Offset:-5
Orientation:reverse strand
Alignment:-----ATATATAT--------
NNNNAATATATATANCTANNN

SeqBias: TA-repeat

Match Rank:2
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-ATATATAT-
TATATATATA

Cf2/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-ATATATAT
TATATATAC

Cf2/MA0015.1/Jaspar

Match Rank:4
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--ATATATAT
NTATATATAC

PB0080.1_Tbp_1/Jaspar

Match Rank:5
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---ATATATAT-----
TCTTTATATATAAATA

TATA-box/SacCer-Promoters/Homer

Match Rank:6
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:ATATATAT---
-TATATAWDVV

MOT2/MA0379.1/Jaspar

Match Rank:7
Score:0.82
Offset:2
Orientation:forward strand
Alignment:ATATATAT
--ATATA-

PB0163.1_Six6_2/Jaspar

Match Rank:8
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----ATATATAT-----
ANNNGGATATATCCNNN

NHP6A/MA0345.1/Jaspar

Match Rank:9
Score:0.79
Offset:-7
Orientation:forward strand
Alignment:-------ATATATAT------
ATGACCTATATATAAAAATGA

TBP(- other)/several species/AthaMap

Match Rank:10
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-ATATATAT---
ACTATAAATACC