Information for 3-GCACGGTGGC (Motif 5)


Reverse Opposite:

p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.883
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif3.10%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets33.7 +/- 18.3bp
Average Position of motif in Background46.3 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RPN4/MA0373.1/Jaspar

Match Rank:1
Score:0.75
Offset:4
Orientation:forward strand
Alignment:GCACGGTGGC-
----GGTGGCG

MET31/MA0333.1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GCACGGTGGC-
--AGTGTGGCG

MET32/MA0334.1/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GCACGGTGGC-
----TGTGGCG

RPN4(MacIsaac)/Yeast

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCACGGTGGC----
---CGGTGGCAAAA

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:5
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GCACGGTGGC---
----GGTGGCAAA

CRZ1/MA0285.1/Jaspar

Match Rank:6
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GCACGGTGGC----
-----GTGGCTNNG

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCACGGTGGC----
ATGTACAGTAGCAAAG

ERF094/MA1049.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCACGGTGGC-
---CGGCGGCG

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCACGGTGGC----
ATTTACAGTAGCAAAA

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCACGGTGGC-----
NGTAGGTTGGCATNNN