Information for 8-CATCATTTAM (Motif 8)


Reverse Opposite:

p-value:1e-6
log p-value:-1.600e+01
Information Content per bp:1.773
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets43.0 +/- 21.0bp
Average Position of motif in Background36.4 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CATCATTTAM--
TATCATAATTAAGGA

skn-1/MA0547.1/Jaspar

Match Rank:2
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------CATCATTTAM
AATTGTCATCATTTT-

ap/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CATCATTTAM
-ATNATT---

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CATCATTTAM-
-ANCGTTTANN

eve/dmmpmm(Down)/fly

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CATCATTTAM
-ATNATTT--

eve/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CATCATTTAM--
--TCAATTAAAT

zen/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CATCATTTAM--
--TCAATTAAAT

ATHB-6/MA0953.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CATCATTTAM
NATNATTGN-

ap/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CATCATTTAM
TATTATT---

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CATCATTTAM--
TCACCCATCAATAAACA