Information for 5-GGGCGTGGTG (Motif 10)


Reverse Opposite:

p-value:1e-12
log p-value:-2.813e+01
Information Content per bp:1.681
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.37%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets29.2 +/- 17.7bp
Average Position of motif in Background8.3 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SP3/MA0746.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGTGGTG
GGGGGCGTGGN-

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGTGGTG--
NNAGGGGCGGGGTNNA

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGTGGTG
NANAAGGGCGTGGTC

SP8/MA0747.1/Jaspar

Match Rank:4
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GGGCGTGGTG
AGTGGGCGTGGC-

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGGCGTGGTG
TGGGTGGGGC-

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGTGGTG
TGGGTGTGGCN

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGGCGTGGTG
DGGGYGKGGC-

KLF16/MA0741.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGTGGTG
GGGGGCGTGGC-

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGTGGTG
TGGGTGTGGC-

Run/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GGGCGTGGTG
---GGCGGTG