Information for 6-AGCCCAGCCT (Motif 11)


Reverse Opposite:

p-value:1e-11
log p-value:-2.709e+01
Information Content per bp:1.715
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif7.87%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif1.13%
Average Position of motif in Targets39.9 +/- 18.7bp
Average Position of motif in Background44.9 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGCCCAGCCT
TGCCCAGNHW

ACE2/MA0267.1/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AGCCCAGCCT
--ACCAGCA-

SWI5/MA0402.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGCCCAGCCT
-AACCAGCA-

SWI5/Literature(Harbison)/Yeast

Match Rank:4
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:AGCCCAGCCT
---CCAGCA-

CRZ1(MacIsaac)/Yeast

Match Rank:5
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AGCCCAGCCT-
----CAGCCAC

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AGCCCAGCCT-
---BCAGACWA

SWI5(MacIsaac)/Yeast

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGCCCAGCCT
-AACCAGCA-

YML081W(MacIsaac)/Yeast

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGCCCAGCCT---
---CCAGTCTGAA

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGCCCAGCCT
--ACCAGCA-

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGCCCAGCCT---
NAGCCCCGCCCCCN