Information for 6-CCAGCTAC (Motif 12)


Reverse Opposite:

p-value:1e-11
log p-value:-2.694e+01
Information Content per bp:1.672
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif10.30%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif2.25%
Average Position of motif in Targets34.2 +/- 20.3bp
Average Position of motif in Background31.4 +/- 39.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1(MacIsaac)/Yeast

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CCAGCTAC
-CAGCCAC

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCTAC
CACAGN---

ovo/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCAGCTAC-
-CCGTTACA

ACE2/MA0267.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTAC
ACCAGCA--

ovo/MA0126.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCAGCTAC-
ACNGTTACT

prd/MA0239.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCAGCTAC-
ACNGTTACT

grh/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCTAC
AGCAGGTA-

ovo/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCAGCTAC-
ACNGTTACT

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCAGCTAC
-CAGCC--

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTAC---
AGCAGCTGCTNN