Information for 12-GTTTCTTCTC (Motif 14)


Reverse Opposite:

p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.738
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif7.75%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif1.71%
Average Position of motif in Targets35.6 +/- 18.8bp
Average Position of motif in Background36.5 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SFL1/MA0377.1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GTTTCTTCTC-------
TNTTATTTCTTCTATNNNNNA

GLN3/GLN3_RAPA/8-GZF3,11-GLN3(Harbison)/Yeast

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTTTCTTCTC
-TATCTTATC

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GTTTCTTCTC-
-CKTCKTCTTY

kni/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTTCTTCTC
-TTTGTTCCC

DAL82/DAL82_SM/3-DAL82(Harbison)/Yeast

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GTTTCTTCTC
---TCTTATC

Mecom/MA0029.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCTTCTC--
TNTTATCTTATCTT

AZF1/MA0277.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTTTCTTCTC
-TTTCTTTTT

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GTTTCTTCTC
---GCTTCC-

PEND/MA0127.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTTTCTTCTC
ACTTCTTATT

GLN3(MacIsaac)/Yeast

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTTTCTTCTC-
-TATCTTATCT