Information for 8-GGGTTTYRCYAT (Motif 16)


Reverse Opposite:

p-value:1e-8
log p-value:-1.845e+01
Information Content per bp:1.703
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets40.5 +/- 20.3bp
Average Position of motif in Background27.3 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

dl/MA0022.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGTTTYRCYAT
GGGGTTTTTCCC-

Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTTYRCYAT
CGGGKTTTTCCC--

dl-A/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGGTTTYRCYAT
GGGTTTTTCCN-

dl/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGTTTYRCYAT
GGATTTTCCCC-

dl/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGGTTTYRCYAT
GGATTTTCC---

dl/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGTTTYRCYAT
GGGTTTTCCCNG

dl(var.2)/MA0023.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGTTTYRCYAT
GGGGATTTCC---

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGTTTYRCYAT
GGGGATTTCC---

dl/dmmpmm(Down)/fly

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGTTTYRCYAT
TGGATTTTCC---

br-Z2/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGGTTTYRCYAT--
----TTAACTATTT