Information for 11-CCCACGTG (Motif 17)


Reverse Opposite:

p-value:1e-7
log p-value:-1.760e+01
Information Content per bp:1.471
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif18.5
Percentage of Background Sequences with motif2.35%
Average Position of motif in Targets36.6 +/- 20.5bp
Average Position of motif in Background42.1 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPT/MA1061.1/Jaspar

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:CCCACGTG-
CCCACGTGC

PHO4(MacIsaac)/Yeast

Match Rank:2
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:CCCACGTG
-CCACGTG

Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer

Match Rank:3
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CCCACGTG--
CCCACGTGCT

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CCCACGTG
GCCACGTG

PIF3/MA0560.1/Jaspar

Match Rank:5
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CCCACGTG-
AGCCACGTGA

PHO4/PHO4_Pi-/38-PHO4(Harbison)/Yeast

Match Rank:6
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:CCCACGTG
-CCACGTG

EmBP-1/MA0128.1/Jaspar

Match Rank:7
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:CCCACGTG-
-CCACGTGT

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CCCACGTG
NCCACGTG

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:CCCACGTG---
-CCACGTGGNN

PIF3(2)(bHLH)/Arabidopsis thaliana/AthaMap

Match Rank:10
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----CCCACGTG-----
NNGGNCCACGTGGCCNT