Information for 1-CCATCACT (Motif 2)


Reverse Opposite:

p-value:1e-22
log p-value:-5.067e+01
Information Content per bp:1.600
Number of Target Sequences with motif232.0
Percentage of Target Sequences with motif26.85%
Number of Background Sequences with motif69.0
Percentage of Background Sequences with motif8.78%
Average Position of motif in Targets37.3 +/- 19.6bp
Average Position of motif in Background33.3 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown2/Drosophila-Promoters/Homer

Match Rank:1
Score:0.83
Offset:1
Orientation:forward strand
Alignment:CCATCACT-
-CATCMCTA

pros/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CCATCACT
-CATGNCT

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCATCACT-----
TCACCCATCAATAAACA

FZF1/MA0298.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCATCACT
CTATCA--

Optix/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCATCACT-
-TATCACNT

Optix/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCATCACT-
NNTATCACTT

SWI5/MA0402.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCATCACT
AACCAGCA--

SWI5(MacIsaac)/Yeast

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCATCACT
AACCAGCA--

ACE2/MA0267.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCATCACT
ACCAGCA--

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCATCACT-----
NNNTCCATCCCATAANN