Information for 10-CTGTGTGTGTGT (Motif 23)


Reverse Opposite:

p-value:1e-2
log p-value:-6.488e+00
Information Content per bp:1.831
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets41.6 +/- 14.3bp
Average Position of motif in Background30.5 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.85
Offset:3
Orientation:reverse strand
Alignment:CTGTGTGTGTGT-
---TGTGTGTGTG

daf-12/MA0538.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTGTGTGTGTGT---
GTGTGTGTGTGCGTG

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGTGTGTGT
ANTCCTTTGTCTNNNN

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTGTGTGTGTGT
--KTGTTTGC--

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGTGTGTGTGT----
NNGCGTGTGTGCNGCN

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGTGTGTGT--
NNNNTTGTGTGCTTNN

RAP1(MacIsaac)/Yeast

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGTGTGTGTGT
GTGTATGGGTGT

MET31(MacIsaac)/Yeast

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTGTGTGTGTGT
---GGTGTGGC-

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTGTGTGTGTGT--
--GGGGGTGTGTCC

RAP1/MA0359.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGTGTGTGTGT
-TGTATGGGTG-