Information for 4-TTAAATRC (Motif 6)


Reverse Opposite:

p-value:1e-15
log p-value:-3.684e+01
Information Content per bp:1.786
Number of Target Sequences with motif112.0
Percentage of Target Sequences with motif12.96%
Number of Background Sequences with motif19.1
Percentage of Background Sequences with motif2.43%
Average Position of motif in Targets36.6 +/- 19.4bp
Average Position of motif in Background35.1 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

C15/MA0170.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TTAAATRC
TTAATTA-

HMRA2/MA0318.1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TTAAATRC
ATTACATG-

C15/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TTAAATRC
NGTTAATTAG

AHL20/MA0933.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTAAATRC
AATTAAAT--

bin/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTAAATRC
ATAAATA-

YAP6(MacIsaac)/Yeast

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTAAATRC
TTACATAA

MATALPHA2/MA0328.2/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTAAATRC
ATTACACG-

CST6(MacIsaac)/Yeast

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTAAATRC-
-NAAATGCA

B-H1/MA0168.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTAAATRC
TTAATTG-

zen/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTAAATRC
CATTAAA---