Information for 5-RWGAGCHRRGAT (Motif 7)


Reverse Opposite:

p-value:1e-14
log p-value:-3.330e+01
Information Content per bp:1.548
Number of Target Sequences with motif136.0
Percentage of Target Sequences with motif15.74%
Number of Background Sequences with motif34.0
Percentage of Background Sequences with motif4.33%
Average Position of motif in Targets37.6 +/- 20.2bp
Average Position of motif in Background37.9 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:RWGAGCHRRGAT--
----GCAGTGATTT

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:RWGAGCHRRGAT--
---TGCTGTGATTT

ARR10(GARP)/Arabidopsis thaliana/AthaMap

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:RWGAGCHRRGAT----
----GCGAAGATCCGC

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:RWGAGCHRRGAT----
--AAGATAAGATAACA

ARR1/MA0945.1/Jaspar

Match Rank:5
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:RWGAGCHRRGAT-----
-------NAGATTCGNT

TOD6?/SacCer-Promoters/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:RWGAGCHRRGAT
--GCGATGAGMT

GLN3(MacIsaac)/Yeast

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:RWGAGCHRRGAT-
---AGATAAGATA

MAC1(MacIsaac)/Yeast

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RWGAGCHRRGAT
-TGAGCGAAAA-

GATA15/MA1016.1/Jaspar

Match Rank:9
Score:0.59
Offset:6
Orientation:forward strand
Alignment:RWGAGCHRRGAT---
------TATGATCAG

GATA8/MA1017.1/Jaspar

Match Rank:10
Score:0.59
Offset:7
Orientation:forward strand
Alignment:RWGAGCHRRGAT----
-------CAGATCTAG