Information for 5-GGTTCAAG (Motif 8)


Reverse Opposite:

p-value:1e-14
log p-value:-3.295e+01
Information Content per bp:1.892
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif9.95%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets34.1 +/- 17.4bp
Average Position of motif in Background50.9 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ct/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GGTTCAAG-
NNGTTCAAGN

ct/MA0218.1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GGTTCAAG
-GTTCAA-

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GGTTCAAG----
BCNGGTTCTAGANCN

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GGTTCAAG----
AGGTCAAGGTCA

vnd/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGTTCAAG---
-GCTCAAGTGC

OPI1/MA0349.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGTTCAAG
CGGTTCG--

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGTTCAAG---
-TTTCAAGTGA

vnd/MA0253.1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGTTCAAG--
-TTTCAAGTG

OPI1(MacIsaac)/Yeast

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGTTCAAG
CGGTTCG--

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------GGTTCAAG---
CTCCAGGGGTCAATTGA