Information for 4-GCTGCAGTGA (Motif 9)


Reverse Opposite:

p-value:1e-12
log p-value:-2.903e+01
Information Content per bp:1.646
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif8.56%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets38.2 +/- 21.9bp
Average Position of motif in Background41.5 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCAGTGA----
NNNANTGCAGTGCNNTT

PHD1/MA0355.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCAGTGA
NGNTGCAGGN-

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCTGCAGTGA
--TGCAGGNA

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCTGCAGTGA---
---GCAGTGATTT

SOK2/MA0385.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTGCAGTGA
ACCTGCAGGCA

vnd/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTGCAGTGA
GCTCAAGTGC

tin/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCTGCAGTGA
-CTCAAGTG-

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTGCAGTGA---
--TGCTGTGATTT

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTGCAGTGA
GGGTGCANT--

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCTGCAGTGA-
-ATGGGGTGAT