Information for 1-TCTSCCTCCC (Motif 1)


Reverse Opposite:

p-value:1e-26
log p-value:-6.094e+01
Information Content per bp:1.665
Number of Target Sequences with motif338.0
Percentage of Target Sequences with motif21.37%
Number of Background Sequences with motif131.8
Percentage of Background Sequences with motif8.12%
Average Position of motif in Targets36.4 +/- 19.0bp
Average Position of motif in Background39.9 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCR2/MA0305.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCTSCCTCCC
---GCTTCCT

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCTSCCTCCC--
KGCCCTTCCCCA

GCR2(MacIsaac)/Yeast

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCTSCCTCCC
---GCTTCCN

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCTSCCTCCC----
---NCTTCCCGCCC

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCTSCCTCCC
CNGTCCTCCC

ADR1/Literature(Harbison)/Yeast

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCTSCCTCCC
----ACCCCN

ADR1(MacIsaac)/Yeast

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCTSCCTCCC
----ACCCCN

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCTSCCTCCC--
-GCCCCGCCCCC

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TCTSCCTCCC--
------TCCCCA

SeqBias: G/A bias

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCTSCCTCCC
CCCCCCCCCC