Information for 6-DGGCDKGGTGGC (Motif 11)


Reverse Opposite:

p-value:1e-11
log p-value:-2.748e+01
Information Content per bp:1.675
Number of Target Sequences with motif133.0
Percentage of Target Sequences with motif8.41%
Number of Background Sequences with motif45.1
Percentage of Background Sequences with motif2.78%
Average Position of motif in Targets35.7 +/- 17.9bp
Average Position of motif in Background39.8 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RPN4/MA0373.1/Jaspar

Match Rank:1
Score:0.72
Offset:6
Orientation:forward strand
Alignment:DGGCDKGGTGGC-
------GGTGGCG

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:2
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:DGGCDKGGTGGC---
------GGTGGCAAA

MET32/MA0334.1/Jaspar

Match Rank:3
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:DGGCDKGGTGGC-
------TGTGGCG

MET31/MA0333.1/Jaspar

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:DGGCDKGGTGGC-
----AGTGTGGCG

RPN4(MacIsaac)/Yeast

Match Rank:5
Score:0.65
Offset:5
Orientation:forward strand
Alignment:DGGCDKGGTGGC----
-----CGGTGGCAAAA

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:DGGCDKGGTGGC-----
-NGTAGGTTGGCATNNN

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:DGGCDKGGTGGC
-GGCGCGCT---

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----DGGCDKGGTGGC
NNAGGGGCGGGGTNNA

AtMYB84(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--DGGCDKGGTGGC
GGGGGGTAGGTGG-

RAX3/MA0576.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--DGGCDKGGTGGC
GGGGGGTAGGTGG-