Information for 10-CTWCATSTTT (Motif 13)


Reverse Opposite:

p-value:1e-10
log p-value:-2.310e+01
Information Content per bp:1.493
Number of Target Sequences with motif195.0
Percentage of Target Sequences with motif12.33%
Number of Background Sequences with motif95.9
Percentage of Background Sequences with motif5.91%
Average Position of motif in Targets33.8 +/- 19.9bp
Average Position of motif in Background32.8 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

sd/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CTWCATSTTT
-AANATGTNT

br-Z4/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:CTWCATSTTT--
-----TCTTTAC

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CTWCATSTTT---
ANTNTTACATGTATNTA

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTWCATSTTT---
ANTNNTACATGTANNTN

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTWCATSTTT---
NNTATTACATGTANNNT

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CTWCATSTTT--
----KTGTTTGC

mirr/MA0233.1/Jaspar

Match Rank:7
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CTWCATSTTT
-----TGTTT

YAP5/MA0417.1/Jaspar

Match Rank:8
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CTWCATSTTT
----ATGCTT

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTWCATSTTT---
ANTATTACATGTANNNN

YAP5(MacIsaac)/Yeast

Match Rank:10
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CTWCATSTTT
----ATGCTT