Information for 9-KCATATRCCTRG (Motif 15)


Reverse Opposite:

p-value:1e-8
log p-value:-2.058e+01
Information Content per bp:1.693
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets36.5 +/- 15.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TaMYB80(MYB)/Triticum aestivum/AthaMap

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-KCATATRCCTRG
NGGATATTCCC--

MOT2/MA0379.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:KCATATRCCTRG
--ATATA-----

NEUROG2/MA0669.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-KCATATRCCTRG
AACATATGTC---

MOT3/MA0340.1/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:KCATATRCCTRG
-----TACCTN-

MOT3/Literature(Harbison)/Yeast

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:KCATATRCCTRG
-----TACCTN-

MOT3(MacIsaac)/Yeast

Match Rank:6
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:KCATATRCCTRG
-----TACCTN-

Cf2/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-KCATATRCCTRG
TATATATAC----

Atoh1/MA0461.2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-KCATATRCCTRG
AACATATGTT---

TATA-box/SacCer-Promoters/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---KCATATRCCTRG
BBHWTATATA-----

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:KCATATRCCTRG
GHATATKCAT--