Information for 14-CAGGCCTGTC (Motif 16)


Reverse Opposite:

p-value:1e-7
log p-value:-1.778e+01
Information Content per bp:1.544
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets40.7 +/- 18.9bp
Average Position of motif in Background53.3 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCCTGTC
CNAGGCCT---

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCCTGTC
CTAGGCCT---

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------CAGGCCTGTC
GGGGCCGAGGCCTG--

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CAGGCCTGTC--
NNNNTGAGCACTGTNNG

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CAGGCCTGTC
----GCTGTG

pros/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGGCCTGTC
-AGNCATG--

SKN7/MA0381.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGGCCTGTC
--GGCCAT--

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAGGCCTGTC--
----GCTGTCAA

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGGCCTGTC-----
AAAGACCTGTCAATCC

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGGCCTGTC-----
AAGCACCTGTCAATAT