Information for 15-TGGGTNTCTA (Motif 17)


Reverse Opposite:

p-value:1e-7
log p-value:-1.738e+01
Information Content per bp:1.641
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets41.8 +/- 17.7bp
Average Position of motif in Background34.5 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Hr46/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGGGTNTCTA
AATTGGGTCA---

YPR022C/MA0436.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGGTNTCTA
NGTGGGG-----

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGGTNTCTA---
-AGGTCTCTAACC

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTNTCTA
GTGGAT-----

PB0201.1_Zfp281_2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGTNTCTA--
NNNATTGGGGGTNTCCT

grh/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGGTNTCTA
CTGGTTTTAT-

RAP1(MacIsaac)/Yeast

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGTNTCTA
GTGTATGGGTGT---

PCF/Arabidopsis-Promoters/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGGGTNTCTA
NNWWWTGGGCYTDDN

Su(H)/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGGGTNTCTA
ATGAGAA----

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------TGGGTNTCTA
GTATTGGGTGGGTAATT-