Information for 18-RCCTASRTRS (Motif 18)


Reverse Opposite:

p-value:1e-7
log p-value:-1.709e+01
Information Content per bp:1.604
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif3.29%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets31.9 +/- 22.6bp
Average Position of motif in Background43.6 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tag/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:RCCTASRTRS
--CTACCTG-

ABI3/MA0564.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RCCTASRTRS-
--CTGCATGCA

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RCCTASRTRS----
--CAAGATGGCGGC

PIF3(2)(bHLH)/Arabidopsis thaliana/AthaMap

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---RCCTASRTRS----
NNGGNCCACGTGGCCNT

Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:RCCTASRTRS-
-CCCACGTGCT

DRE1C/MA0985.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:RCCTASRTRS
ACCGACAT--

bZIP68/MA0968.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:RCCTASRTRS-
--CCACGTGGC

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RCCTASRTRS
TGACCTARTT--

MAX::MYC/MA0059.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RCCTASRTRS--
-ACCACGTGCTC

Mycn/MA0104.3/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:RCCTASRTRS
-GCCACGTG-