Information for 19-CACTTCTCTA (Motif 19)


Reverse Opposite:

p-value:1e-7
log p-value:-1.676e+01
Information Content per bp:1.757
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets34.5 +/- 17.6bp
Average Position of motif in Background30.7 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GAT1/GAT1_RAPA/1-GZF3,2-GLN3(Harbison)/Yeast

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CACTTCTCTA
--CTTATCT-

GAT1(MacIsaac)/Yeast

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CACTTCTCTA
--CTTATCT-

GZF3/Literature(Harbison)/Yeast

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CACTTCTCTA
--CTTATC--

GZF3(MacIsaac)/Yeast

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CACTTCTCTA
--CTTATC--

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CACTTCTCTA--
CACTTCCYCTTT

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CACTTCTCTA
-GCTTCC---

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CACTTCTCTA
GTTTCACTTCCG--

GAT1/MA0300.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CACTTCTCTA
--CTTATCGG

PB0058.1_Sfpi1_1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACTTCTCTA---
NNACTTCCTCTTNN

DAL82/DAL82_SM/3-DAL82(Harbison)/Yeast

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACTTCTCTA
-TCTTATC--