Information for 2-AAGAGCTGGG (Motif 2)


Reverse Opposite:

p-value:1e-22
log p-value:-5.296e+01
Information Content per bp:1.772
Number of Target Sequences with motif173.0
Percentage of Target Sequences with motif10.94%
Number of Background Sequences with motif39.5
Percentage of Background Sequences with motif2.44%
Average Position of motif in Targets33.5 +/- 19.2bp
Average Position of motif in Background39.5 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AAGAGCTGGG
NAACAGCTGG-

ACE2/MA0267.1/Jaspar

Match Rank:2
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:AAGAGCTGGG
---TGCTGGT

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAGAGCTGGG
AACAGCTG--

SWI5/MA0402.1/Jaspar

Match Rank:4
Score:0.73
Offset:3
Orientation:forward strand
Alignment:AAGAGCTGGG-
---TGCTGGTT

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAGAGCTGGG-
AACAGCTGCAG

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAGAGCTGGG-
GACAGCTGCAG

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AAGAGCTGGG
CAGCAGCTGN-

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAGAGCTGGG
NAHCAGCTGD-

PL0013.1_hlh-2::hlh-15/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAGAGCTGGG----
GGACCAGCTGGGCCCT

SWI5(MacIsaac)/Yeast

Match Rank:10
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AAGAGCTGGG-
---TGCTGGTT