Information for 21-TGGGGTCAGG (Motif 21)


Reverse Opposite:

p-value:1e-7
log p-value:-1.656e+01
Information Content per bp:1.676
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif3.10%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets35.6 +/- 19.8bp
Average Position of motif in Background23.4 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

usp/MA0016.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:TGGGGTCAGG-
-GGGGTCACGG

usp/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.79
Offset:1
Orientation:forward strand
Alignment:TGGGGTCAGG
-GGGGTCACG

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TGGGGTCAGG---
NTNNNGGGGTCANGNNN

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----TGGGGTCAGG--
AGAGCGGGGTCAAGTA

ADR1/MA0268.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGTCAGG
GTGGGGT----

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TGGGGTCAGG---
GGCGAGGGGTCAAGGGC

Hr46/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TGGGGTCAGG
--GGGTCA--

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TGGGGTCAGG---
CTCCAGGGGTCAATTGA

ARALYDRAFT_495258/MA1095.1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGTCAGG
GTGGGCCC---

ARALYDRAFT_484486/MA1098.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGTCAGG
GTGGGCCC---