Information for 15-GCGACTAG (Motif 22)


Reverse Opposite:

p-value:1e-3
log p-value:-9.069e+00
Information Content per bp:1.808
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets37.7 +/- 18.6bp
Average Position of motif in Background53.6 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ARF1(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCGACTAG
TGGGAGACAAG

UME6/UME6_YPD/51-UME6(Harbison)/Yeast

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCGACTAG
TCGGCGGCTA-

br-Z3/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCGACTAG---
---ACTAGTTT

br-Z2/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCGACTAG
-TAAATAG

ABF2/MA0266.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGACTAG-
--CTCTAGA

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCGACTAG---
-CGTCTAGACA

TOD6?/SacCer-Promoters/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCGACTAG--
GCGATGAGMT

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCGACTAG
ACCGATTAG

br(var.2)/MA0011.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCGACTAG--
--AAATAGTA

UME6(MacIsaac)/Yeast

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCGACTAG
TCGGCGGCTA-