Information for 2-TGGGAYTACAGG (Motif 3)


Reverse Opposite:

p-value:1e-18
log p-value:-4.326e+01
Information Content per bp:1.714
Number of Target Sequences with motif138.0
Percentage of Target Sequences with motif8.72%
Number of Background Sequences with motif30.7
Percentage of Background Sequences with motif1.89%
Average Position of motif in Targets36.1 +/- 17.4bp
Average Position of motif in Background41.6 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MATALPHA2/MA0328.2/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TGGGAYTACAGG
----ATTACACG

HMRA2/MA0318.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TGGGAYTACAGG
----ATTACATG

GCR1(MacIsaac)/Yeast

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGGGAYTACAGG
-GGGCTTCCA--

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGGGAYTACAGG-
-GGGATTGCATNN

GCR1/MA0304.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGGGAYTACAGG
--GGCTTCCA--

oc/MA0234.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGGGAYTACAGG
--GGATTA----

bcd/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGGAYTACAGG
-NGGATTAGNGG

bcd/MA0212.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGGGAYTACAGG
--GGATTA----

Gsc/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGGGAYTACAGG
--GGATTA----

Gsc/MA0190.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGGGAYTACAGG
--GGATTA----