Information for 3-AATCACTTGA (Motif 4)


Reverse Opposite:

p-value:1e-16
log p-value:-3.876e+01
Information Content per bp:1.897
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif4.80%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets33.7 +/- 17.1bp
Average Position of motif in Background29.8 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

tin/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.82
Offset:3
Orientation:forward strand
Alignment:AATCACTTGA
---CACTTGA

vnd/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:AATCACTTGA-
---CACTTGAN

tin/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.79
Offset:3
Orientation:forward strand
Alignment:AATCACTTGA-
---CACTTGAG

tin/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.78
Offset:3
Orientation:forward strand
Alignment:AATCACTTGA
---CACTTAA

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:5
Score:0.78
Offset:1
Orientation:forward strand
Alignment:AATCACTTGA-
-ATCACGTGAC

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:6
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AATCACTTGA-
-ATCACGTGAC

PL0005.1_hlh-30/Jaspar

Match Rank:7
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AATCACTTGA-----
AGAATCACGTGACAATT

TYE7/TYE7_YPD/39-CBF1(Harbison)/Yeast

Match Rank:8
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AATCACTTGA
-ATCACGTGA

MLX/MA0663.1/Jaspar

Match Rank:9
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AATCACTTGA-
-ATCACGTGAT

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:AATCACTTGA--
--NCACTTGAAA