Information for 2-KAAAATAA (Motif 5)


Reverse Opposite:

p-value:1e-16
log p-value:-3.740e+01
Information Content per bp:1.632
Number of Target Sequences with motif447.0
Percentage of Target Sequences with motif28.26%
Number of Background Sequences with motif261.5
Percentage of Background Sequences with motif16.12%
Average Position of motif in Targets37.9 +/- 20.0bp
Average Position of motif in Background36.7 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bin/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:KAAAATAA
ATAAATA-

SUM1/MA0398.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:KAAAATAA-
AAAAATTTT

NCU00019/MA0929.1/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---KAAAATAA-
ATTGTAAACAAA

eve/dmmpmm(Down)/fly

Match Rank:4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:KAAAATAA-
--AAATNAT

CST6(MacIsaac)/Yeast

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:KAAAATAA-
-NAAATGCA

SPT23/MA0388.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:KAAAATAA-
-GAAATCAA

SPT23/SPT23_YPD/[](Harbison)/Yeast

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:KAAAATAA-
-GAAATCAA

SPT23(MacIsaac)/Yeast

Match Rank:8
Score:0.71
Offset:1
Orientation:forward strand
Alignment:KAAAATAA-
-GAAATCAA

tll/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:KAAAATAA-
--AAATTAA

CCA1/MA0972.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:KAAAATAA--
--AAATATCT