Information for 7-ACWTSAAG (Motif 9)


Reverse Opposite:

p-value:1e-13
log p-value:-3.060e+01
Information Content per bp:1.709
Number of Target Sequences with motif320.0
Percentage of Target Sequences with motif20.23%
Number of Background Sequences with motif174.4
Percentage of Background Sequences with motif10.75%
Average Position of motif in Targets37.6 +/- 19.4bp
Average Position of motif in Background37.6 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ARR1/MA0274.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACWTSAAG
ACTTGAAT

ARR1(MacIsaac)/Yeast

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACWTSAAG
ACTTGAAT

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACWTSAAG
NCACTTGAAA

vnd/MA0253.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACWTSAAG
CACTTGAAA

tin/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ACWTSAAG--
---TCAAGTG

tin/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACWTSAAG
CCACTTGAGN

ceh-22/MA0264.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ACWTSAAG
ACCACTTGAAA

MA0264.1_ceh-22/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ACWTSAAG
ACCACTTGAAA

vnd/dmmpmm(Papatsenko)/fly

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACWTSAAG
CACTTGAN-

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACWTSAAG--
ACATCAAAGG