Homer Known Motif Enrichment Results (/Volumes/Macintosh_HD/Users/zhengao/bio/Struc_features/in_data/chip-seq/1_narowPeaks/more/data/9_homer_out/49/TI/)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 3000, Total Background Sequences = 2557
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer1e-189-4.365e+020.00001043.034.77%117.64.60%motif file (matrix) pdf
2Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer1e-158-3.645e+020.0000844.028.13%80.53.15%motif file (matrix) pdf
3Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer1e-144-3.330e+020.0000744.024.80%61.32.40%motif file (matrix) pdf
4Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer1e-126-2.917e+020.0000535.017.83%17.30.68%motif file (matrix) pdf
5AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-71-1.639e+020.0000493.016.43%70.12.74%motif file (matrix) pdf
6RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer1e-71-1.639e+020.0000427.014.23%45.11.76%motif file (matrix) pdf
7Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-70-1.627e+020.0000468.015.60%61.22.39%motif file (matrix) pdf
8BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-65-1.516e+020.0000490.016.33%78.63.07%motif file (matrix) pdf
9Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-63-1.455e+020.0000427.014.23%57.52.25%motif file (matrix) pdf
10RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer1e-61-1.409e+020.0000502.016.73%92.83.63%motif file (matrix) pdf
11RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-59-1.370e+020.0000388.012.93%48.01.88%motif file (matrix) pdf
12RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer1e-55-1.283e+020.0000420.014.00%67.72.65%motif file (matrix) pdf
13Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-50-1.172e+020.0000314.010.47%34.31.34%motif file (matrix) pdf
14Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-48-1.111e+020.0000261.08.70%20.60.81%motif file (matrix) pdf
15PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-38-8.881e+010.0000436.014.53%112.74.41%motif file (matrix) pdf
16Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-33-7.710e+010.0000313.010.43%65.12.55%motif file (matrix) pdf
17ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-32-7.410e+010.0000300.010.00%63.02.46%motif file (matrix) pdf
18ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-29-6.762e+010.0000388.012.93%113.14.42%motif file (matrix) pdf
19PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-26-6.100e+010.0000198.06.60%31.01.21%motif file (matrix) pdf
20PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer1e-26-6.091e+010.0000174.05.80%21.60.84%motif file (matrix) pdf
21SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer1e-26-6.065e+010.0000187.06.23%26.91.05%motif file (matrix) pdf
22Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)1e-25-5.975e+010.0000260.08.67%58.22.28%motif file (matrix) pdf
23ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-23-5.450e+010.0000340.011.33%105.34.12%motif file (matrix) pdf
24IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer1e-22-5.192e+010.0000294.09.80%84.63.31%motif file (matrix) pdf
25GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-22-5.190e+010.0000238.07.93%56.72.22%motif file (matrix) pdf
26Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-21-5.047e+010.0000143.04.77%17.50.68%motif file (matrix) pdf
27SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-21-4.851e+010.0000142.04.73%18.80.74%motif file (matrix) pdf
28IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-19-4.527e+010.0000141.04.70%20.10.79%motif file (matrix) pdf
29IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer1e-19-4.488e+010.0000121.04.03%13.20.52%motif file (matrix) pdf
30Initiator/Drosophila-Promoters/Homer1e-19-4.484e+010.0000613.020.43%292.511.44%motif file (matrix) pdf
31bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer1e-19-4.391e+010.0000245.08.17%69.72.73%motif file (matrix) pdf
32ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-18-4.175e+010.0000216.07.20%58.02.27%motif file (matrix) pdf
33EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-16-3.840e+010.0000151.05.03%30.91.21%motif file (matrix) pdf
34EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-16-3.806e+010.0000295.09.83%105.74.14%motif file (matrix) pdf
35EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-15-3.609e+010.0000196.06.53%54.52.13%motif file (matrix) pdf
36Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-15-3.491e+010.0000115.03.83%18.20.71%motif file (matrix) pdf
37ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer1e-15-3.473e+010.000084.02.80%7.20.28%motif file (matrix) pdf
38Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-10-2.413e+010.0000136.04.53%39.71.55%motif file (matrix) pdf
39Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-10-2.372e+010.0000133.04.43%38.51.51%motif file (matrix) pdf
40SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer1e-9-2.188e+010.0000401.013.37%209.98.21%motif file (matrix) pdf
41c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer1e-9-2.147e+010.000077.02.57%14.50.57%motif file (matrix) pdf
42IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer1e-9-2.096e+010.0000100.03.33%25.71.00%motif file (matrix) pdf
43Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-9-2.076e+010.0000140.04.67%46.31.81%motif file (matrix) pdf
44ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-8-2.031e+010.0000122.04.07%38.01.49%motif file (matrix) pdf
45IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer1e-8-1.958e+010.0000243.08.10%110.74.33%motif file (matrix) pdf
46SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-8-1.931e+010.0000620.020.67%376.614.73%motif file (matrix) pdf
47SeqBias: CG-repeat1e-7-1.826e+010.0000258.08.60%123.24.82%motif file (matrix) pdf
48PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer1e-7-1.808e+010.0000170.05.67%68.02.66%motif file (matrix) pdf
49E-box/Arabidopsis-Promoters/Homer1e-7-1.764e+010.000073.02.43%16.90.66%motif file (matrix) pdf
50ETS(ETS)/Promoter/Homer1e-7-1.699e+010.000092.03.07%26.01.02%motif file (matrix) pdf
51MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-7-1.673e+010.0000387.012.90%216.68.47%motif file (matrix) pdf
52NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-7-1.669e+010.000097.03.23%29.41.15%motif file (matrix) pdf
53Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-7-1.669e+010.0000128.04.27%46.01.80%motif file (matrix) pdf
54NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-7-1.632e+010.000054.01.80%9.30.36%motif file (matrix) pdf
55SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-7-1.619e+010.0000157.05.23%64.32.51%motif file (matrix) pdf
56Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-6-1.513e+010.000044.01.47%6.90.27%motif file (matrix) pdf
57SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer1e-6-1.433e+010.0000157.05.23%69.02.70%motif file (matrix) pdf
58MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-5-1.378e+010.0000112.03.73%42.21.65%motif file (matrix) pdf
59Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-5-1.345e+010.0000185.06.17%88.23.45%motif file (matrix) pdf
60Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-5-1.341e+010.000043.01.43%7.20.28%motif file (matrix) pdf
61MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-5-1.341e+010.0000152.05.07%67.52.64%motif file (matrix) pdf
62KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer1e-5-1.328e+010.0000228.07.60%117.24.59%motif file (matrix) pdf
63Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-5-1.322e+010.000045.01.50%8.90.35%motif file (matrix) pdf
64Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer1e-5-1.320e+010.000098.03.27%35.41.39%motif file (matrix) pdf
65CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer1e-5-1.307e+010.000060.02.00%15.60.61%motif file (matrix) pdf
66Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer1e-5-1.285e+010.0000129.04.30%54.72.14%motif file (matrix) pdf
67MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-5-1.235e+010.000070.02.33%21.70.85%motif file (matrix) pdf
68Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-5-1.223e+010.0000180.06.00%88.63.47%motif file (matrix) pdf
69Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-5-1.214e+010.0000105.03.50%41.61.63%motif file (matrix) pdf
70ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer1e-5-1.209e+010.000098.03.27%37.41.46%motif file (matrix) pdf
71NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer1e-5-1.160e+010.000126.00.87%2.50.10%motif file (matrix) pdf
72CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer1e-5-1.158e+010.000186.02.87%31.41.23%motif file (matrix) pdf
73n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer1e-4-1.126e+010.000185.02.83%31.31.22%motif file (matrix) pdf
74AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-4-1.112e+010.0001296.09.87%172.56.75%motif file (matrix) pdf
75Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-4-1.111e+010.000159.01.97%18.00.70%motif file (matrix) pdf
76Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer1e-4-1.097e+010.000133.01.10%5.80.23%motif file (matrix) pdf
77SeqBias: polyA-repeat1e-4-1.057e+010.00012855.095.17%2365.992.56%motif file (matrix) pdf
78Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-4-1.042e+010.0001336.011.20%204.58.00%motif file (matrix) pdf
79EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-4-1.005e+010.000226.00.87%3.20.13%motif file (matrix) pdf
80BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer1e-4-9.972e+000.0002306.010.20%184.47.21%motif file (matrix) pdf
81BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer1e-4-9.577e+000.0003240.08.00%138.85.43%motif file (matrix) pdf
82ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer1e-3-9.180e+000.000536.01.20%8.40.33%motif file (matrix) pdf
83Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer1e-3-9.049e+000.0005318.010.60%198.07.74%motif file (matrix) pdf
84E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer1e-3-8.885e+000.000618.00.60%1.60.06%motif file (matrix) pdf
85FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-3-8.801e+000.0007169.05.63%91.93.60%motif file (matrix) pdf
86RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-3-8.642e+000.000814.00.47%0.30.01%motif file (matrix) pdf
87SeqBias: GCW-triplet1e-3-8.595e+000.00082892.096.40%2412.694.38%motif file (matrix) pdf
88PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-3-8.441e+000.000948.01.60%15.60.61%motif file (matrix) pdf
89SeqBias: GA-repeat1e-3-8.437e+000.00091022.034.07%757.729.64%motif file (matrix) pdf
90SeqBias: A/T bias1e-3-8.412e+000.00102468.082.27%2006.978.51%motif file (matrix) pdf
91Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer1e-3-8.343e+000.001055.01.83%19.40.76%motif file (matrix) pdf
92Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-3-8.324e+000.001042.01.40%12.90.50%motif file (matrix) pdf
93USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-3-8.204e+000.001165.02.17%25.61.00%motif file (matrix) pdf
94E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer1e-3-8.023e+000.001313.00.43%1.00.04%motif file (matrix) pdf
95Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-3-8.023e+000.001313.00.43%0.30.01%motif file (matrix) pdf
96Sp1(Zf)/Promoter/Homer1e-3-7.574e+000.002128.00.93%6.30.25%motif file (matrix) pdf
97ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer1e-3-7.518e+000.002221.00.70%3.70.14%motif file (matrix) pdf
98c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-3-7.496e+000.002261.02.03%24.40.95%motif file (matrix) pdf
99Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-3-7.475e+000.0022168.05.60%95.93.75%motif file (matrix) pdf
100E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-3-7.447e+000.002347.01.57%16.10.63%motif file (matrix) pdf
101KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-3-7.417e+000.0023152.05.07%84.73.31%motif file (matrix) pdf
102PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer1e-3-7.139e+000.0030152.05.07%85.63.35%motif file (matrix) pdf
103MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer1e-3-7.097e+000.0031117.03.90%61.72.41%motif file (matrix) pdf
104Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-3-6.976e+000.003577.02.57%35.71.40%motif file (matrix) pdf
105CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-3-6.974e+000.0035112.03.73%58.52.29%motif file (matrix) pdf
106FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-3-6.916e+000.0036197.06.57%118.34.63%motif file (matrix) pdf
107Oct6(POU,Homeobox)/NPC-Oct6-ChIP-Seq(GSE35496)/Homer1e-2-6.815e+000.004062.02.07%26.71.04%motif file (matrix) pdf
108Tal11e-2-6.638e+000.0047155.05.17%89.53.50%motif file (matrix) pdf
109NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer1e-2-6.633e+000.0047106.03.53%56.02.19%motif file (matrix) pdf
110RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer1e-2-6.399e+000.005921.00.70%4.60.18%motif file (matrix) pdf
111HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer1e-2-6.336e+000.0062222.07.40%139.25.44%motif file (matrix) pdf
112Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-2-6.120e+000.007643.01.43%16.90.66%motif file (matrix) pdf
113Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-2-6.013e+000.0084205.06.83%128.45.02%motif file (matrix) pdf
114Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer1e-2-5.996e+000.008446.01.53%18.10.71%motif file (matrix) pdf
115Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer1e-2-5.846e+000.0097508.016.93%363.714.23%motif file (matrix) pdf
116Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer1e-2-5.819e+000.009952.01.73%22.40.88%motif file (matrix) pdf
117PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer1e-2-5.790e+000.0101515.017.17%369.614.46%motif file (matrix) pdf
118c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-2-5.711e+000.010850.01.67%21.20.83%motif file (matrix) pdf
119PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer1e-2-5.609e+000.0119124.04.13%71.62.80%motif file (matrix) pdf
120T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer1e-2-5.552e+000.01259.00.30%0.80.03%motif file (matrix) pdf
121Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer1e-2-5.487e+000.013268.02.27%33.61.32%motif file (matrix) pdf
122Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-2-5.403e+000.0143103.03.43%57.92.26%motif file (matrix) pdf
123Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer1e-2-5.242e+000.016673.02.43%37.11.45%motif file (matrix) pdf
124Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer1e-2-5.165e+000.017883.02.77%44.91.76%motif file (matrix) pdf
125Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer1e-2-5.099e+000.018943.01.43%18.50.72%motif file (matrix) pdf
126Unknown1/Arabidopsis-Promoters/Homer1e-2-5.097e+000.018924.00.80%7.60.30%motif file (matrix) pdf
127Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-2-4.855e+000.0237185.06.17%119.34.67%motif file (matrix) pdf