Homer de novo Motif Results (/Volumes/Macintosh_HD/Users/zhengao/bio/Struc_features/in_data/chip-seq/1_narowPeaks/more/data/9_homer_out/49/TI//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 3000
Total background sequences = 2558
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-192	-4.426e+02	42.47%	8.64%	18.9bp (23.4bp)	Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer(0.973) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-94	-2.187e+02	49.00%	22.42%	20.0bp (24.6bp)	ETV6/MA0645.1/Jaspar(0.809) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-94	-2.184e+02	33.87%	10.92%	20.5bp (27.5bp)	RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.974) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-92	-2.141e+02	20.93%	3.51%	19.6bp (21.8bp)	BATF::JUN/MA0462.1/Jaspar(0.969) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-62	-1.440e+02	34.17%	14.89%	20.6bp (25.1bp)	IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.816) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-16	-3.793e+01	3.10%	0.33%	19.8bp (19.5bp)	SUT1?/SacCer-Promoters/Homer(0.803) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-15	-3.571e+01	7.77%	2.92%	21.3bp (16.9bp)	PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.705) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-15	-3.546e+01	3.70%	0.63%	20.1bp (17.0bp)	ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer(0.709) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-13	-3.172e+01	3.93%	0.90%	17.9bp (12.0bp)	ERF4/MA0992.1/Jaspar(0.852) More Information \| Similar Motifs Found	motif file (matrix)
10 *		1e-11	-2.722e+01	7.60%	3.33%	20.8bp (29.4bp)	SeqBias: polyC-repeat(0.905) More Information \| Similar Motifs Found	motif file (matrix)
11 *		1e-11	-2.661e+01	1.60%	0.05%	20.9bp (0.0bp)	PB0205.1_Zic1_2/Jaspar(0.729) More Information \| Similar Motifs Found	motif file (matrix)
12 *		1e-9	-2.208e+01	2.77%	0.64%	21.2bp (18.6bp)	NAC083/MA1043.1/Jaspar(0.724) More Information \| Similar Motifs Found	motif file (matrix)
13 *		1e-8	-1.914e+01	2.77%	0.77%	20.4bp (21.8bp)	ARR1/Literature(Harbison)/Yeast(0.757) More Information \| Similar Motifs Found	motif file (matrix)
14 *		1e-6	-1.410e+01	2.93%	1.11%	19.9bp (20.5bp)	SUM1/MA0398.1/Jaspar(0.750) More Information \| Similar Motifs Found	motif file (matrix)